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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs56246602 chr18:33273806 T/C 3.49E-5 507 37.77 30.45 7.37 KM Plot
KIRC rs56261553 chr18:33274266 A/G 3.43E-5 507 37.73 36.4 7.37 KM Plot
KIRC rs56278443 chr8:92372125 C/T 1.38E-6 500 37.83 26.27 3.67 KM Plot
KIRC rs56293236 chr16:2928565 G/A 3.09E-5 504 36.12 42.2 3.37 KM Plot
KIRC rs56294283 chr6:25976099 A/G 2.75E-8 496 37.6 36.28 2.38 KM Plot
KIRC rs56339361 chr18:33217461 G/A 3.23E-5 509 37.75 31.77 7.37 KM Plot
KIRC rs56359432 chr10:33039093 G/T 3.65E-6 505 37.37 37.53 7.33 KM Plot
KIRC rs56393755 chr16:2949967 C/A 1.43E-5 498 37.03 39.23 9.37 KM Plot
KIRC rs56963988 chr2:109481657 A/T 1.28E-11 508 37.7 27.4 2.3 KM Plot
KIRC rs57015583 chr2:137447960 A/G 0.000135 505 37.47 37.03 11.4 KM Plot
KIRC rs57216475 chr10:32960999 T/A 3.31E-6 505 37.57 37.5 7.33 KM Plot
KIRC rs57281251 chr11:1529538 A/T 8.08E-5 509 5.47 37.37 37.47 KM Plot
KIRC rs57919520 chr18:33227913 T/A 3.23E-5 509 37.75 31.77 7.37 KM Plot
KIRC rs57942850 chr11:34771758 G/GA 9.12E-8 506 37.73 26.12 3.3 KM Plot
KIRC rs583715 chr8:2854505 A/T 9.55E-6 497 37.75 32.28 15.37 KM Plot